Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872724.1_cds_XP_016434866.1_30883
CDS Infomation

[gene=LOC107761191] [db_xref=GeneID:107761191] [protein=replication factor C subunit 1-like isoform X2] [protein_id=XP_016434866.1] [location=join(6814..6816,7937..8050,9633..10208,10287..10354,10584..10659,10732..10793,10882..11018,13302..13465,13562..13750,13864..13985,14056..14263,14625..14678,16209..16378,17245..17335,18258..18439,18549..18588,18970..19094,19742..19814,19889..19981,20070..20313,20678..20725,20840..20997)] [gbkey=CDS]
Sequence

ATGTCAGATATCAGAAAATGGTTCATGAAGCAGCATGACAAAGGTACGGGTAATGGGAGC
ATGTCCAAGAATGCTCCAGAAAAGCCTTCAGCAGAAAAGCCTTCTCCAGAAAACCTGGTA
CAAGAGGGACAAGAGACTGCCGGCAGAAGGAAAACTAGTAAATATTTTGCTACAGACAAG
GTGAAGGCAAAAGAAGAAAAAGTAGAGGCAGTATCAGCAAAAAGAAAAGCTCAAAATGCT
GGTGGAAGTTCATCAGTTAATGAGAAGCCACCAGCTGCGAAAAGAATTCACAAAGCTGAG
GATGACGATGACTTTGTACTGCCTGCATCTGCAATGGGATCCAGAGGTGCCACTCCCACC
AAAAAGTCGGCAAGTGGCTCTGGAAGGGGACCTGCACGGAAGTCTGTGATCAGTGATGAA
AGTGACGATGATCTTAAGGATACAAAATCTGATCTCAAACCTACTGGAAGAGGGCGTGGT
GGACGAGCAGCTCAGACTGGTGGAAAAGGCATCCCTCTTGATGAAAGTGATGATGATGCC
TCAGCTGATAAGGACACCAAATCTGGTGGACGAGGGCGTGGTGGTAAAGGACCATCTGCA
GCACCAAGTGGTGGACGAGGCAGAGGCGGTGGAGGACGGGGCGGTTTCATGAATTTTGGT
GAAAGAAAAGACCCTCCTCACAAGGGGGAAAAGGAAGTTCCTGAAGGTGCCTCAAACTGT
TTAGCTGGTTTGACTTTTGTAATTAGTGGAACTCTGGACAGTTTAGAAAGAGAAGAAGCT
GAGGATTTGATTAAACGCCATGGTGGTCGTGTCACAGGATCTGTTAGCAAGAAAACGAAT
TATCTTTTATGCGATGAAGACATCGAGGGACGGAAATCCTCTAAAGCCAAGGAACTCGGA
ACTGCATTTCTCACTGAGGATGGTTTGTTCAATATGATCCGGTCATCAAAGAAATCAAAA
CCAGCTACACAACCCGAGTCAAAGAAATCGGTGGACACTGTTGTTTCTCCTGCAAAGAGA
AATTCACAAAATACAAGTGATGGAACTGGAAGCACTGCCACAAAGATTTTAGCTGCCAAA
GAATTGACACCTAGTGCATCTCCTGCCAAGAGGAAAGGCCAAGCTAAAGAGTCTTCACTA
CCATGGACAGAAAAATACAGGCCCAAAGCTATTGTAGACATAATAGGGAATAAGTCACTG
GTAGAACAGATTCAGCGTTGGCTGGAGAGCTGGGATGAGCATTTTCTAAATGCAGCTAGT
AAGGGGAAGGGGAAAAAACAGAATGACTCTGGTGCTAAAAAGGCAGTTCTGTTGAGTGGT
ATGCCGGGTATAGGGAAGACTACATCAGCAAAGGTGGTTAGTCAGCTACTGGGTTTCCAA
ACTATCGAGGTAAATGCTAGTGATAGTCGTGGAAAGGCTGATTCAAAAATTGAGAAAGGA
ATTGGTGGTAGTACTGCTAATTCCATAAAAGAACTAGTTAGCAATGAATCACTAGGTGCT
AATATTGGCAGATCGCACCATCAGAAGACTGTTCTGATTATGGATGAGGTTGATGGCATG
TCTGCTGGAGATAGAGGTGGTGTTGCCGATCTTATTGCTAGCATCAAGTTATCCAAAATT
CCTATTATCTGCATTTGTAATGATCGCTACAGTCAGAAATTGAAGAGCCTTGTCAATTAT
TGCTTACCAATTGTCTTCCGAAAACCGACTAAACAGCAGATGGCAAAGAGGTTAAAGCAA
GTGGCAAATGCTGAAGGCCTTCAAGTCAATGAGATTGCTCTTGAGGAATTGGCAGAACGT
GTTGGTGGCGATATGCGTATGGCTCTAAATCAATTGCAATACATGAGTCTCTCCAAGTCT
GTGATCCAATACGATGATATAAGACAGCGCCTTCTAAGCAGTTCAAAGGATGAAGACATC
TCACCCTTCAAAGCTGTCGAACTGCTGTTTGATTTTAATGCCAAGAACTTGAAAATAGAT
CGAAGAATTGATCTAAGTATGAGTGACCTAGATCTTGTCCCGCTTCTTATACAGGAGAAC
TATCTCAATTACAAGCCAAGTTCTCTTGGCAAAGATGATGATGGTTTAAAGCGGATGAGC
CTAATCGCGCGTGCTGCTGACTCTATTGCAAATGGTGATTTAATAAATGTACAGATTCGT
AGATACCAGCAGTGGCAACTATCTCCAGCTGGTTGCCTTTCGTCTTGCATAATTCCTGCT
TCGTTGTTGCATGGACAGAGGCAGACTCTTGAGCAGGGAGAACGCAACTTTAATAGGTTT
GGTGGCTGGCTAGGAAAGAACTCTACAATGGGAAAGAATTACCGAATTTTGGAGGACTTG
CATGTTCACCTACTCGCTTCTCGTGAATCATATTTGGGAAGGGCAAACCTGAGACTTGAC
TACTTTACTCTTCTTACAAAGAAGTTGACAGATCCATTAAAACTGCTACCTAAGGATGAA
GCTGTCGAGAACGTTGTGGATTTCATGGATTCATACTCTATAAGCCAGGATGACTTCGAT
AATATTGTGGAGATATCAAAATTCAAGGGACATCCAAATCCACTGGATGGTGTTCAGCCT
GTTGTGAAAGCTGCACTGACAAGGGCATACAACAAAGGAAGCAAATCACGTGTTATTCGC
ACAGCAGATTTAATATCCCTTCCTGGAATTAAAAAAGCTCCCAAGAAGCGGGTTGCAGCG
ATGCTGGAGCCACTAGATGAAGGCTTAGCTGAAGAAAATGGTGAAGCAATTGCTGAAGAT
GAAGAGAACTCATCAGAGACAGAGGATATAGATGTTGAGAAAAAGTTGGAGTCAGATCTT
CAGAGTCTCAATTTGAAGGGAATCCAAGTAAATGTAGATCTGAAGGGTGCTGGTGGAAAG
AAGCCGTCTGCTGGAAGAGGAAGAGGAAGTTCTAGTAGCAGCAGGGAGAAAGGAGGCGCT
GAATCCTCGGGCAAGAGAGGTGGCCGGGGTTCTGGAGCTACCAAGAGAAAGAGGTGA

Peptide Sequence

PEP ID

XP_016434866.1
PEP Infomation

PREDICTED: replication factor C subunit 1-like isoform X2 [Nicotiana tabacum]
Sequence

MSDIRKWFMKQHDKGTGNGSMSKNAPEKPSAEKPSPENLVQEGQETAGRRKTSKYFATDK
VKAKEEKVEAVSAKRKAQNAGGSSSVNEKPPAAKRIHKAEDDDDFVLPASAMGSRGATPT
KKSASGSGRGPARKSVISDESDDDLKDTKSDLKPTGRGRGGRAAQTGGKGIPLDESDDDA
SADKDTKSGGRGRGGKGPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGASNC
LAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKELG
TAFLTEDGLFNMIRSSKKSKPATQPESKKSVDTVVSPAKRNSQNTSDGTGSTATKILAAK
ELTPSASPAKRKGQAKESSLPWTEKYRPKAIVDIIGNKSLVEQIQRWLESWDEHFLNAAS
KGKGKKQNDSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKADSKIEKG
IGGSTANSIKELVSNESLGANIGRSHHQKTVLIMDEVDGMSAGDRGGVADLIASIKLSKI
PIICICNDRYSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAEGLQVNEIALEELAER
VGGDMRMALNQLQYMSLSKSVIQYDDIRQRLLSSSKDEDISPFKAVELLFDFNAKNLKID
RRIDLSMSDLDLVPLLIQENYLNYKPSSLGKDDDGLKRMSLIARAADSIANGDLINVQIR
RYQQWQLSPAGCLSSCIIPASLLHGQRQTLEQGERNFNRFGGWLGKNSTMGKNYRILEDL
HVHLLASRESYLGRANLRLDYFTLLTKKLTDPLKLLPKDEAVENVVDFMDSYSISQDDFD
NIVEISKFKGHPNPLDGVQPVVKAALTRAYNKGSKSRVIRTADLISLPGIKKAPKKRVAA
MLEPLDEGLAEENGEAIAEDEENSSETEDIDVEKKLESDLQSLNLKGIQVNVDLKGAGGK
KPSAGRGRGSSSSSREKGGAESSGKRGGRGSGATKRKR

Transcript Sequence

Gene sequence data has not been registered.